Upload of data to XNAT
Description:
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In order to upload imaging data to XNAT you must log in with your credentials. Now you can upload a DICOM.zip to the prearchive as explained in the following steps.
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By clicking the XNAT icon in the top left corner the website provides you with an overview of your projects and the most recent data activity.
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To create a new project navigate to the header and click New > Project and give it a title, running title, project ID. Here you can also provide further information, such as a keyword. Lastly, define if the project is private, protected, or public and click Create.
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Clicking the XNAT icon once more shows the newly created project in the project section. In order to upload subject data click Upload > Images > Compressed Uploader. Proceed by selecting your project and choosing a destination. By clicking Prearchive the data will temporarily be stored in a medium where you can control and change subject information before forwarding them to the archive. Now you can choose the data to be uploaded. Attention: Data has to be stored in a zip. file. Click Begin Upload to upload the imaging data to the prearchive.
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Now you can proceed to the prearchive by navigating to Upload > Prearchive. The data of the newly added subject can now be reviewed and archived. In order to do so click on Review and Archive. Pick a subject ID by clicking Add New Subject and provide any other necessary demographical information. By proceeding with Submit you have successfully uploaded one subject scan to the archive.
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By clicking Manage Files you can view the DICOMS of the scan. By clicking View Images, XNAT provides you with a preliminary graphical representation of your imaging data.
Status:
- First complete individual dataset in BIDS format in my XNAT project: Project / Subject / Experiment (BIDS session) / Scans (BIDS run)